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| Class Summary | |
| AdvancedOptions | |
| Browser | |
| BuildProgramMenu | BuildProgramMenu class construct the program menus. | 
| ColorMenu | |
| ColumnData | Content of each column in the DragJTable | 
| DragJTable | |
| LaunchJalView | |
| MemoryComboBox | |
| ResultsMenuBar | Sets up a results menu bar with save and close | 
| ScrollPanel | |
| SequenceData | Object to represent the content of each row in the DragJTable of a SequenceList. | 
| SequenceList | SequenceList extends JFrame to display a set of sequences that the user is working on in a session. | 
| SequenceListTableModel | |
| SetUpMenuBar | Sets the top menu bar for Jemboss main window | 
| ShowResultSet | Displays JTabbedPane of the contents of the Hashtable | 
| ShowSavedResults | Shows a list of results from the SOAP server and displays individual result sets | 
| SplashThread | |
| SwingWorker | This is the 3rd version of SwingWorker (also known as SwingWorker 3), an abstract class that you subclass to perform GUI-related work in a dedicated thread. | 
| SwingWorker.ThreadVar | Class to maintain reference to current worker thread under separate synchronization control. | 
| TabListCellRenderer | Adapted from an example at http://www.spindoczine.com/sbe/ | 
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